50 lines
1.9 KiB
Markdown
50 lines
1.9 KiB
Markdown
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# LINUX_INSTALL
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## Prepare your environment
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### Install Miniconda
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1. Get the link for the latest version of Miniconda from https://docs.conda.io/en/latest/miniconda.html
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2. Download the installer using wget
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````
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wget https://repo.anaconda.com/miniconda/Miniconda3-latest-Linux-x86_64.sh
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````
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3. Make the installer executable
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````
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chmod +x ./Miniconda3-latest-Linux-x86_64.sh
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````
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4. Run the installer
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````
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./Miniconda3-latest-Linux-x86_64.sh
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````
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5. Holder enter until you are prompted to accept the license terms. Enter yes.
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6. Initialize the conda environment
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````
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conda init bash
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````
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7. Source .bashrc
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````
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source ~/.bashrc
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````
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8. Create a conda environment for the hub
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````
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conda create --name hub python=3.9.16
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````
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### Setup SRA
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1. Get the sra binary and libshortwave.so library from Guille or Koa
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2. Place the binary and the library into your directory of choice
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3. Make a symlink for the binary and place it into /usr/local/bin/sra
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````
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sudo ln -s ~/sra /usr/local/bin/sra
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````
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4. Make a symlink for the library and place it into /usr/local/lib/libshortwave.so
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````
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sudo ln -s ~/libshortwave.so /usr/local/lib/libshortwave.so
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````
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### Setup INSEL
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1. TBD
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### Get a Python editor
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You are welcome to use the Python editor of your preference. The CERC team generally uses PyCharm to develop the hub.
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The latest version of PyCharm can be downloaded from [JetBrains website](https://www.jetbrains.com/pycharm/promo/?source=google&medium=cpc&campaign=14127625109&term=pycharm&content=536947779504&gad=1&gclid=CjwKCAjw0ZiiBhBKEiwA4PT9z2AxPfy39x_RcBqlYxJ6sm_s55T9qvA_sZ8ZfkhIVX6FOD-ySbmzARoCcpQQAvD_BwE).
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For setup and installation instructions, please view the "Get a Python Editor"
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from the [WINDOWS_INSTALL](https://nextgenerations-cities.encs.concordia.ca/gitea/CERC/hub/src/branch/main/hub/WINDOWS_INSTALL.md)
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documentation.
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