LINUX_INSTALL

Prepare your environment

Install Miniconda

Get the link for the latest version of Miniconda from https://docs.conda.io/en/latest/miniconda.html

Download the installer using wget

wget https://repo.anaconda.com/miniconda/Miniconda3-latest-Linux-x86_64.sh

Make the installer executable

chmod +x ./Miniconda3-latest-Linux-x86_64.sh

Run the installer
```
./Miniconda3-latest-Linux-x86_64.sh
```
Holder enter until you are prompted to accept the license terms. Enter yes.
Initialize the conda environment
```
conda init bash
```
Source .bashrc
```
source ~/.bashrc
```
Create a conda environment for the hub
```
conda create --name hub python=3.9.16
```

Setup SRA

Get the sra binary and libshortwave.so library from Guille or Koa
Place the binary and the library into your directory of choice
Make a symlink for the binary and place it into /usr/local/bin/sra
```
sudo ln -s ~/sra /usr/local/bin/sra
```
Make a symlink for the library and place it into /usr/local/lib/libshortwave.so
```
sudo ln -s ~/libshortwave.so /usr/local/lib/libshortwave.so
```

Setup INSEL

Get a Python editor

You are welcome to use the Python editor of your preference. The CERC team generally uses PyCharm to develop the hub. The latest version of PyCharm can be downloaded from JetBrains website. For setup and installation instructions, please view the "Get a Python Editor" from the WINDOWS_INSTALL documentation.

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